Course Description

Continuing Education Hours: 38.5

Functional medicine determines how and why illness occurs and restores health by addressing the root causes of disease. While Complex trauma usually occurs because of repeated traumatic experience, toxic stress and repetitive adversity by a child or young person, although it can also occur as a result of experiences as an adult. Some people experience trauma across their lives. This course examines the interplay between trauma and physical, emotional and psychological health as well as how to structure the treatment to speed recovery from trauma.

Certification Description

Those who obtain the Certified Functional Medicine and Trauma Specialist (CFMTS) certification demonstrate knowledge of the medical impacts of trauma, toxic stress, and repeated adversity. CFMTS certification reflects an understanding of the physiological complications that often accompany trauma and the role of medical stabilization in the healing process. It also addresses the therapeutic challenges tied to repeated relational violations, including trust issues, boundary challenges, and early attachment disruptions.

Learning Objectives

  • Participants will explore naturopathic medicine as it relates to a salutogenic approach and will look at functional approaches to addressing trauma.

  • Participants will seek to develop an understanding of hormonal and biochemical activity in the brain and nervous system.

  • Participants will be able to identify factors to improve treatment outcomes for dissociative clients.

  • Participants will gain a clearer understanding of dissociative disorders and will learn how to identify dissociation and prepare clients for treatment.

  • Participants will learn about different assessment measures to identify dissociation and will learn approaches to work with dissociative disorders and clients with dissociation.

  • Participants will be able to identify several factors that contribute to dissociation.

  • Participants will be able to articulate the differences between simple and complex trauma and identify the distinct challenges for diagnosis, treatment planning, stabilization and treatment of complex trauma.

  • Understand the neurobiology of complex trauma and how chronic exposure to threatening environments can produce the spectrum of symptoms of complex trauma.

  • Participants will seek to examine the interplay between trauma and physical, emotional, and psychological health as well as how to structure the treatment to speed recovery from trauma.

Course Curriculum

    1. Welcome and Handouts

    2. Introduction Overview

    3. Introduction

    4. Introduction Quiz

    1. Module 1 Overview

    2. Naturopathic Medicine and Salutogenesis

    3. Module 1 Quiz

    1. Module 2 Overview

    2. Functional Approaches to Addressing Trauma

    3. Module 2 Quiz

    1. Module 3 Overview

    2. The Mind-Body Connection

    3. Module 3 Quiz

    1. Module 4a Overview

    2. Hormonal and Biochemical Activity in the Brain and Nervous System

    3. Module 4a Quiz

    1. Module 4b Overview

    2. Hormonal and Biochemical Activity in the Brain and Nervous System

    3. Module 4b Quiz

About this course

  • $261.00
  • 187 lessons
  • 38.5 hours of video content

Dr. Robert Rhoton, PsyD, LPC, F.A.A.E.T.S.

Founder and Chief Clinical Officer of the Arizona Trauma Institute and President of Trauma Institute International, Dr. Rhoton brings over four decades of leadership in trauma treatment and mental health systems. A Diplomate of the American Academy of Experts in Traumatic Stress, he has directed outpatient clinics, juvenile justice programs, and therapeutic services for individuals and families. With a background in counselor education and a commitment to non-egoic, trauma-informed models, Dr. Rhoton consults internationally to improve trauma care systems and elevate clinical practice across diverse populations.
Dr. Robert Rhoton, PsyD, LPC, F.A.A.E.T.S.

What This Version Includes

This purchase includes both the full Certified Functional Medicine and Trauma Specialist (CFMTS) course and the official certification process through Trauma Institute International (TII).

You will receive:

  • 38.5 CE hours of trauma training (CFMTS course)

  • Access to the certification portal

  • A unique coupon code to activate your certification (valid for 1 year)

  • Step-by-step instructions to complete the application, upload documents, and take the exam

  • Certification valid for 1 year upon approval with option for annual renewal


Certification Requirements

To earn the Certified Functional Medicine and Trauma Specialist (CFMTS) credential, you must:

  1. Complete the full CFMTS course within 12 months.

  2. Submit the following to Trauma Institute International:

    • Proof of course completion

    • Proof of a Bachelor's degree/license (or enrollment) in a mental-health-related field, medicine, or addiction.

  3. Pass the certification exam (80% passing grade).

  4. Complete the process within 90 days of certification access activation.

Pricing Options

Course + Certification (CFMTS + TII Certification)

Just want the course without certification?

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Refund Policy

Course Refund/Cancellation Policy:

We do not allow for refunds to occur after the completion of the first module of any of our courses. 

  • You will have a 14 day window in which to make a request for a refund, providing you have not completed any of the modules in a given course. 
  • If you believe you have made a purchase by mistake then you can contact us at [email protected]
  • Refund requests that come after 14 days of the initial purchases or that come after completing any of the modules will not be approved. 
  • There is an $8 Processing Fee for every refund that we process.


Certification Refund/Cancellation Policy:

At Trauma Institute International, we strive to provide a fair and transparent certification process. Please review our refund policy carefully before making a purchase.

Certification Completion Deadline

  • You have 90 days from the date of purchase to complete the certification process.
  • If you do not complete the required steps within 90 days, your fee is forfeited, and you will need to repurchase to restart the process.

Refund Requests

  • Refunds can be requested within 14 days of purchase.
  • Once you open the examination, refunds are no longer available.

Certification Eligibility & Refunds

  • If you apply for certification but do not qualify, you will not be refunded if you have taken the exam.
  • If you apply for certification, do not take the exam, and do not qualify, you will be refunded and withdrawn from the process.

Processing Fees

  • All refunds will have an $8.00 processing fee deducted from the total refund amount.


If you have any questions or need assistance, please contact [email protected].